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Medium: THERMODESULFOBIUM MEDIUM



Medium features

ID:1005
Name:THERMODESULFOBIUM MEDIUM
PH Info: 5.5, H2SO4
Is Complex:false
Is Aerobic:true
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1005.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 5.00E-5 1.94E-7
CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 1.90E-3 7.97E-6
KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 0.75 0.01
HCl HCl SEED-cpd00099### 6.72E-3 1.92E-4
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.03 0.00
ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 6.98E-4 5.17E-6
NTA NTA SEED-cpd10393### 0.13 0.00
Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 1.00E-4 4.90E-7
CuCl2 x 2 H2O CuCl2 SEED-cpd00058#cpd00099## 2.00E-5 1.18E-7
NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.50 0.01
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 5.00E-5 1.49E-7
H3BO3 Boric acid SEED-cpd09225### 5.99E-5 9.65E-7
Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 3.59E-4 1.48E-6
NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.39E-4 1.01E-6
MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 0.25 0.00
Na2SO4 Sodium sulfate SEED-cpd00048#cpd00971#cpd09400# 2.80 0.02
H2O H2O SEED-cpd00001### null null
Cysteine-HCl x H2O Cysteine-HCl SEED-cpd00084#cpd00099## 0.25 0.00
Folic acid Folic acid SEED-cpd00393### 2.00E-5 4.56E-8
Biotin Biotin SEED-cpd00104### 2.00E-5 8.23E-8
K2HPO4 di Potassium hydrogen phosphate SEED-cpd00009#cpd00205## 0.78 0.00
MnCl2 x 4 H2O MnCl2 SEED-cpd00030#cpd00099## 9.98E-4 5.05E-6
FeSO4 x 7 H2O Iron sulfate SEED-cpd00048#cpd10515## 0.01 0.00
Na-acetate Na-acetate SEED-cpd00029#cpd00971## 0.15 0.00
Nicotinic acid Niacin SEED-cpd00218### 5.00E-5 4.10E-7
Lipoic acid Lipoic acid SEED-cpd00541### 5.00E-5 2.44E-7
p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 5.00E-5 3.68E-7
Na3EDTA Na3EDTA SEED-cpd00240#cpd00971## 0.04 0.00
Vitamin B12 Coenzyme B12 SEED-cpd00166### 1.00E-6 6.33E-10
Riboflavin Riboflavin SEED-cpd00220### 5.00E-5 1.33E-7
FeCl2 x 4 H2O Iron chloride SEED-cpd00099#cpd10516## 0.03 0.00
NaCl NaCl SEED-cpd00099#cpd00971## 0.20 0.00
H2SO4 H2SO4 SEED-cpd00048### null null


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00058 Cu2+ 1.178388936106279E-7
cpd00244 Ni2+ 1.0063114596862195E-6
cpd00220 RIBF 1.3297872340425533E-7
cpd00030 Mn2+ 5.048108473754885E-6
cpd00034 Zn2+ 5.172254548813153E-6
cpd00240 EDTA 1.11731843575419E-4
cpd00013 NH3 0.009433962264150943
cpd09225 Boric acid 9.653286139489986E-7
cpd00029 Acetate 0.0018292682926829267
cpd00541 Lipoate 2.439024390243903E-7
cpd00009 Phosphate 0.01003831417624521
cpd00218 Niacin 4.098360655737705E-7
cpd00263 Pyridoxol 4.901960784313725E-7
cpd00443 ABEE 3.6764705882352943E-7
cpd00149 Co2+ 7.966632389182571E-6
cpd00166 Calomide 6.333122229259026E-10
cpd10393 Triglycollamic acid 6.808510638297873E-4
cpd00971 Na+ 0.04505232351641194
cpd11145 Sodium molybdate 1.4820563119646204E-6
cpd00063 Ca2+ 2.0525189824455428E-4
cpd10515 Fe2+ 3.583587170757929E-5
cpd00644 PAN 1.9379844961240311E-7
cpd10516 fe3 1.760452845730588E-4
cpd00048 Sulfate 0.020766086633513793
cpd00084 L-Cysteine 0.001435544071202986
cpd00001 H2O 0.019975062344139653
cpd09400 Sodium sulfate 0.0
cpd00305 THI 1.486767766874814E-7
cpd00099 Cl- 0.0153112700806688
cpd00104 BIOT 8.23045267489712E-8
cpd00205 K+ 0.014521072796934865
cpd00254 Mg 0.0010119409026512851
cpd00393 FOL 4.555808656036447E-8

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