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Medium: SYFAC medium



Medium features

ID:1041
Name:SYFAC medium
PH Info: 7.0 - 7.2
Is Complex:true
Is Aerobic:true
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1041.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 1.78E-3 7.48E-6
D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 4.95E-5 1.92E-7
(NH4)2Ni(SO4)2 x 6 H2O (NH4)2Ni(SO4)2 SEED-cpd00013#cpd00048#cpd00244# 2.77E-3 7.00E-6
Na2SeO4 Na2SeO4 SEED-cpd00971#cpd03396## 9.89E-5 5.18E-7
Na2-fumarate Na2-fumarate SEED-cpd00106#cpd00971## 3.17 0.02
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 9.89E-4 6.76E-6
Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.30 0.00
Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 9.89E-5 4.85E-7
CuSO4 x 5 H2O CuSO4 SEED-cpd00048#cpd00058## 9.89E-5 3.96E-7
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 4.95E-5 1.47E-7
CO2 CO2 SEED-cpd00011### null null
Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 9.89E-5 4.08E-7
H3BO3 Boric acid SEED-cpd09225### 9.89E-5 1.60E-6
MnSO4 x H2O MnSO4 SEED-cpd00030#cpd00048## 4.95E-3 2.92E-5
MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 0.03 0.00
H2O H2O SEED-cpd00001### null null
Resazurin Resazurin SEED-cpd08053### 4.95E-4 2.16E-6
Sea salts (SIGMA) Sea salts rich-seawater# 34.62 null
Folic acid Folic acid SEED-cpd00393### 1.98E-5 4.51E-8
Biotin Biotin SEED-cpd00104### 1.98E-5 8.14E-8
Na2WO4 x 2 H2O Na2WO4 SEED-cpd00971#cpd15574## 9.89E-5 6.72E-7
NaHCO3 sodium bicarbonate SEED-cpd00242#cpd00971#cpd09249# 1.98 0.02
Yeast extract Yeast extract rich-peptone# 0.99 null
Na-acetate Na-acetate SEED-cpd00029#cpd00971## 1.58 0.02
FeSO4 x 7 H2O Iron sulfate SEED-cpd00048#cpd10515## 9.89E-4 3.54E-6
Nicotinic acid Niacin SEED-cpd00218### 4.95E-5 4.05E-7
N2 N2 SEED-cpd00528### null null
Lipoic acid Lipoic acid SEED-cpd00541### 4.95E-5 2.41E-7
p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 4.95E-5 3.64E-7
KAl(SO4)2 x 12 H2O potassium alum alum# 1.78E-4 3.74E-7
Riboflavin Riboflavin SEED-cpd00220### 4.95E-5 1.32E-7
Vitamin B12 Coenzyme B12 SEED-cpd00166### 9.89E-7 6.26E-10
ZnSO4 x 7 H2O ZnSO4 SEED-cpd00034#cpd00048## 1.78E-3 6.18E-6
Distilled water H2O SEED-cpd00001### null null
NaCl NaCl SEED-cpd00099#cpd00971## 9.89E-3 1.71E-4
H2SO4 H2SO4 SEED-cpd00048### null null


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00244 Ni2+ 6.995542090802638E-6
cpd00058 Cu2+ 3.960439173099906E-7
cpd00242 H2CO3 0.023550468654326223
cpd00106 Fumarate 0.01978239366963403
cpd00220 RIBF 1.3153187280341777E-7
cpd00030 Mn2+ 2.9237945122131285E-5
cpd09249 Sodium bicarbonate 0.0
cpd03396 Selenate 5.178637086291631E-7
cpd00034 Zn2+ 6.1809249445133225E-6
cpd00011 CO2 0.0
cpd00013 NH3 1.3991084181605275E-5
cpd09225 Boric acid 1.5953543281962928E-6
cpd00029 Acetate 0.01929989626305759
cpd00541 Lipoate 2.412487032882199E-7
cpd00239 H2S 0.0012193791043538542
cpd00218 Niacin 4.0537691945971373E-7
cpd00263 Pyridoxol 4.848625899420106E-7
cpd08053 Resazurin 2.159649963933846E-6
cpd00443 ABEE 3.636469424565079E-7
cpd00149 Co2+ 7.483881590025484E-6
cpd00166 Calomide 6.264215854855616E-10
cpd15574 tungstate 6.715001245632732E-7
cpd00971 Na+ 0.08502764351165382
cpd11145 Sodium molybdate 4.0822108274110665E-7
cpd00063 Ca2+ 6.952589953290933E-6
cpd00528 N2 0.0
cpd10515 Fe2+ 3.544596608069168E-6
cpd00644 PAN 1.9168986113986464E-7
cpd00048 Sulfate 1.734622746135442E-4
cpd00001 H2O 1.0000000000000002
cpd00305 THI 1.4705912629820123E-7
cpd00099 Cl- 1.9965936154295563E-4
cpd00104 BIOT 8.140902744705362E-8
cpd00254 Mg 1.2011167983991516E-4
cpd00393 FOL 4.5062400158619657E-8

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