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Medium: DESULFITOBACTERIUM PCE II medium



Medium features

ID:1062
Name:DESULFITOBACTERIUM PCE II medium
PH Info: 7.5
Is Complex:true
Is Aerobic:false
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1062.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 0.20 0.00
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.15 0.00
Na2-fumarate Na2-fumarate SEED-cpd00106#cpd00971## 6.50 0.04
Na-pyruvate Na-pyruvate SEED-cpd00020#cpd00971## 4.50 0.04
Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 3.00E-4 1.47E-6
KOH KOH SEED-cpd00001#cpd00205## null null
CuSO4 x 5 H2O CuSO4 SEED-cpd00048#cpd00058## 1.00E-4 4.00E-7
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 2.00E-4 5.95E-7
CO2 CO2 SEED-cpd00011### null null
NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.25 0.00
Calcium pantothenate Calcium pantothenate SEED-cpd00063#cpd00644## 1.00E-4 3.88E-7
Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 1.00E-4 4.13E-7
H3BO3 Boric acid SEED-cpd09225### 1.00E-4 1.61E-6
MgCl2 x 6 H2O Magnesium chloride SEED-cpd00099#cpd00254#cpd04877# 0.40 0.00
NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 3.00E-4 1.26E-6
MnSO4 x H2O MnSO4 SEED-cpd00030#cpd00048## 5.00E-3 2.96E-5
MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 0.03 0.00
H2O H2O SEED-cpd00001### null null
Resazurin Resazurin SEED-cpd08053### 5.00E-4 2.18E-6
sodium dithionite sodium dithionite dithionite# 0.01 0.00
Na2WO4 x 2 H2O Na2WO4 SEED-cpd00971#cpd15574## 4.00E-6 2.72E-8
NaHCO3 sodium bicarbonate SEED-cpd00242#cpd00971#cpd09249# 3.00 0.04
KCl KCl SEED-cpd00099#cpd00205## 0.50 0.01
Yeast extract Yeast extract rich-peptone# 2.00 null
FeSO4 x 7 H2O Iron sulfate SEED-cpd00048#cpd10515## 0.02 0.00
Nitrilotriacetic acid Nitrilotriacetic acid SEED-cpd10393### 0.02 0.00
Nicotinic acid Niacin SEED-cpd00218### 2.00E-4 1.64E-6
N2 N2 SEED-cpd00528### null null
Na2SeO3 x 5 H2O Sodium selenite SEED-cpd00971#cpd03387## 6.00E-6 2.26E-8
CoSO4 x 7 H2O CoSO4 SEED-cpd00048#cpd00149## 1.80E-3 6.38E-6
p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 8.00E-5 5.88E-7
KAl(SO4)2 x 12 H2O potassium alum alum# 2.00E-4 4.20E-7
Vitamin B12 Coenzyme B12 SEED-cpd00166### 1.00E-4 6.33E-8
ZnSO4 x 7 H2O ZnSO4 SEED-cpd00034#cpd00048## 1.80E-3 6.25E-6
D(+)-Biotin D(+)-Biotin SEED-cpd00104### 2.00E-5 8.23E-8
NaCl NaCl SEED-cpd00099#cpd00971## 1.01 0.02
NaOH Sodium hydroxide SEED-cpd09244### 5.00E-4 2.78E-5


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00058 Cu2+ 4.004004004004004E-7
cpd00244 Ni2+ 1.2610340479192938E-6
cpd00242 H2CO3 0.03571428571428571
cpd00106 Fumarate 0.040625
cpd00030 Mn2+ 2.9559562518474725E-5
cpd09249 Sodium bicarbonate 0.0
cpd00034 Zn2+ 6.248915118902968E-6
cpd00011 CO2 0.0
cpd09244 Sodium hydroxide 2.777777777777778E-5
cpd00013 NH3 0.0047169811320754715
cpd09225 Boric acid 1.6129032258064516E-6
cpd04877 Magnesium chloride 0.0
cpd00009 Phosphate 0.0014814814814814816
cpd00218 Niacin 1.639344262295082E-6
cpd00263 Pyridoxol 1.4705882352941175E-6
cpd08053 Resazurin 2.1834061135371177E-6
cpd00443 ABEE 5.882352941176471E-7
cpd00149 Co2+ 6.381847190214501E-6
cpd00020 Pyruvate 0.04090909090909091
cpd00166 Calomide 6.333122229259024E-8
cpd10393 Triglycollamic acid 7.978723404255319E-5
cpd03387 Selenite 2.257761053621825E-8
cpd15574 tungstate 2.715546503733876E-8
cpd00971 Na+ 0.1752880946160053
cpd11145 Sodium molybdate 4.127115146512588E-7
cpd00063 Ca2+ 0.0010325133658670989
cpd00528 N2 0.0
cpd10515 Fe2+ 8.242250492743235E-5
cpd00644 PAN 3.8759689922480623E-7
cpd00048 Sulfate 2.4644613847357917E-4
cpd00001 H2O 0.012
cpd00305 THI 5.947071067499256E-7
cpd00104 BIOT 8.23045267489712E-8
cpd00099 Cl- 0.03489919887344714
cpd00205 K+ 0.008238238238238238
cpd00254 Mg 0.002092847398214655

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