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Medium: METHANOREGULA medium



Medium features

ID:1280
Name:METHANOREGULA medium
PH Info: 5.1, HCl
Is Complex:true
Is Aerobic:true
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1280.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 2.19E-5 9.23E-8
KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 0.01 0.00
D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 4.57E-4 1.77E-6
HCl HCl SEED-cpd00099### null null
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 2.14E-3 1.46E-5
ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 6.86E-5 5.08E-7
TiCl3 TiCl3 TiCl3# null null
Homo-PIPES (SIGMA) Homo-PIPES (SIGMA) Homo-PIPES# 1.44 0.00
CuSO4 x 5 H2O CuSO4 SEED-cpd00048#cpd00058## 8.23E-6 3.30E-8
Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 9.14E-4 4.48E-6
NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.02 0.00
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 4.57E-4 1.36E-6
CO2 CO2 SEED-cpd00011### null null
H3BO3 Boric acid SEED-cpd09225### 1.74E-5 2.80E-7
NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.19E-5 9.23E-8
MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 1.42E-3 5.76E-6
H2O H2O SEED-cpd00001### null null
Resazurin Resazurin SEED-cpd08053### 4.57E-4 2.00E-6
Folic acid Folic acid SEED-cpd00393### 1.83E-4 4.17E-7
Biotin Biotin SEED-cpd00104### 1.83E-4 7.53E-7
KCl KCl SEED-cpd00099#cpd00205## 1.83E-3 2.47E-5
Yeast extract Yeast extract rich-peptone# 0.18 null
Coenzyme M Coenzyme M SEED-cpd02246### 0.06 0.00
Na-acetate Na-acetate SEED-cpd00029#cpd00971## 0.02 0.00
Nicotinic acid Niacin SEED-cpd00218### 4.57E-4 3.75E-6
Na-Nitrilotriacetate Na-Nitrilotriacetate SEED-cpd00971#cpd10393## 0.46 0.00
Lipoic acid Lipoic acid SEED-cpd00541### 4.57E-4 2.23E-6
p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 4.57E-4 3.36E-6
MnSO4 x 4 H2O MnSO4 SEED-cpd00030#cpd00048## 2.38E-5 1.06E-7
Na2Mo4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 2.19E-5 9.06E-8
Vitamin B12 Coenzyme B12 SEED-cpd00166### 9.14E-6 5.79E-9
Riboflavin Riboflavin SEED-cpd00220### 4.57E-4 1.22E-6
H2 H2 SEED-cpd11640### null null
Distilled water H2O SEED-cpd00001### null null
NaOH (pellets) Sodium hydroxide SEED-cpd09244### 0.16 0.01
FeCl2 x 4 H2O Iron chloride SEED-cpd00099#cpd10516## 1.23E-3 6.19E-6
NaOH Sodium hydroxide SEED-cpd09244### 0.05 0.00
AlK(SO4)2 x 12 H2O potassium alum alum# 3.15E-3 6.62E-6


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00058 Cu2+ 3.2953258685964094E-8
cpd00244 Ni2+ 9.225250224822231E-8
cpd00220 RIBF 1.21602783049934E-6
cpd00030 Mn2+ 1.0633173587622135E-7
cpd00034 Zn2+ 5.080294047419464E-7
cpd00011 CO2 0.0
cpd09244 Sodium hydroxide 0.011646472497828174
cpd00013 NH3 4.6585337868789806E-4
cpd09225 Boric acid 2.802355748737834E-7
cpd00029 Acetate 1.8958170469638493E-4
cpd00541 Lipoate 2.2303729964280576E-6
cpd00009 Phosphate 9.483215555183002E-5
cpd00263 Pyridoxol 4.482612394781881E-6
cpd08053 Resazurin 1.99662211470634E-6
cpd00218 Niacin 3.747757903834031E-6
cpd00443 ABEE 3.3619592960864104E-6
cpd00149 Co2+ 9.225250224822231E-8
cpd00166 Calomide 5.791342169319213E-9
cpd10393 Triglycollamic acid 0.0021946870284852084
cpd00971 Na+ 0.0023844498877031357
cpd11145 Sodium molybdate 9.057726077116007E-8
cpd00063 Ca2+ 1.6373439897724696E-5
cpd00644 PAN 1.7721955979370225E-6
cpd10516 fe3 6.188442779213077E-6
cpd00048 Sulfate 5.898802326281447E-6
cpd11640 H2 0.0
cpd00001 H2O 0.9885236157468795
cpd02246 CoM 4.539837233864203E-4
cpd00305 THI 1.3595791384708648E-6
cpd00099 Cl- 5.393749572121021E-4
cpd00104 BIOT 7.526361551732541E-7
cpd00205 K+ 1.1954709956630309E-4
cpd00254 Mg 5.759517331719262E-6
cpd00393 FOL 4.1660725673599256E-7

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