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Medium: PFENNIG'S MEDIUM II (modified 1988, for green sulfur bacteria)



Medium features

ID:29
Name:PFENNIG'S MEDIUM II (modified 1988, for green sulfur bacteria)
PH Info: 6.8
Is Complex:false
Is Aerobic:false
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium29.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 0.33 0.00
CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 1.86E-4 7.80E-7
HCl HCl SEED-cpd00099### null null
KCl KCl SEED-cpd00099#cpd00205## 0.33 0.00
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.25 0.00
Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.59 0.00
ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 6.84E-5 5.07E-7
MnCl2 x 4 H2O MnCl2 SEED-cpd00030#cpd00099## 9.77E-5 4.94E-7
FeSO4 x 7 H2O Iron sulfate SEED-cpd00048#cpd10515## 1.47E-3 5.25E-6
CuCl2 x 2 H2O CuCl2 SEED-cpd00058#cpd00099## 1.95E-6 1.15E-8
NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.33 0.01
Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 3.52E-5 1.45E-7
H3BO3 Boric acid SEED-cpd09225### 2.93E-4 4.73E-6
MgSO4 Magnesium sulfate SEED-cpd00048#cpd00254## 0.49 0.00
NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.34E-5 9.86E-8
Vitamin B12 Coenzyme B12 SEED-cpd00166### null null
H2O H2O SEED-cpd00001### null null


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00244 Ni2+ 9.856440139052123E-8
cpd00149 Co2+ 7.80301511008293E-7
cpd00058 Cu2+ 1.1541873937194823E-8
cpd00166 Calomide 1.9690853598503498E-8
cpd00971 Na+ 0.00485523676253661
cpd11145 Sodium molybdate 1.451618103021358E-7
cpd00030 Mn2+ 4.944431319754767E-7
cpd00063 Ca2+ 0.0016824037592706338
cpd10515 Fe2+ 5.251852510931061E-6
cpd00034 Zn2+ 5.066027704803551E-7
cpd09225 Boric acid 4.727514332823588E-6
cpd00013 NH3 0.006315934173104896
cpd00048 Sulfate 0.004107513018865827
cpd00001 H2O 0.9855196995539585
cpd00009 Phosphate 0.002479588971663404
cpd00099 Cl- 0.014589028768912233
cpd00239 H2S 0.002427473219458003
cpd00254 Mg 0.004102261166354895
cpd00205 K+ 0.007003163446995289

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