Medium: METHANOSPHAERA medium I Medium features ID:322 Name:METHANOSPHAERA medium I PH Info: 6.5 - 6.8 Is Complex:true Is Aerobic:true Is SubMedium:false Remarks: Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium322.pdf Metabolites list Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts Name Semi unique name Unique Name Gram Amount Mol Amount D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 1.97E-3 7.63E-6 KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 2.76 0.02 Na2SeO4 Na2SeO4 SEED-cpd00971#cpd03396## 1.87E-3 9.79E-6 CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.08 0.00 Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.37 0.00 Methanol Methanol SEED-cpd00116### null null KOH KOH SEED-cpd00001#cpd00205## null null CuSO4 x 5 H2O CuSO4 SEED-cpd00048#cpd00058## 9.84E-5 3.94E-7 CO2 CO2 SEED-cpd00011### null null NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.98 0.02 H3BO3 Boric acid SEED-cpd09225### 9.84E-5 1.59E-6 Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 9.84E-5 4.06E-7 Nicotinamide Nicotinamide SEED-cpd00133### 1.97E-3 1.61E-5 NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 9.84E-4 4.14E-6 MnSO4 x H2O MnSO4 SEED-cpd00030#cpd00048## 4.92E-3 2.91E-5 MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 0.18 0.00 H2O H2O SEED-cpd00001### null null Pyridoxine-HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 1.97E-3 9.65E-6 Trypticase (BBL) Trypticase rich-peptone# 1.97 null Cysteine-HCl x H2O Cysteine-HCl SEED-cpd00084#cpd00099## 0.86 0.00 Resazurin Resazurin SEED-cpd08053### 9.84E-4 4.30E-6 clarified rumen fluid clarified rumen fluid rich-rumen# 98.43 0.10 Folic acid Folic acid SEED-cpd00393### 4.92E-5 1.12E-7 Biotin Biotin SEED-cpd00104### 9.84E-4 4.05E-6 Na-formate Na-formate SEED-cpd00047#cpd00971## 0.49 0.01 Yeast extract Yeast extract rich-peptone# 1.97 null K2HPO4 di Potassium hydrogen phosphate SEED-cpd00009#cpd00205## 0.59 0.00 Na-acetate Na-acetate SEED-cpd00029#cpd00971## 0.49 0.01 FeSO4 x 7 H2O Iron sulfate SEED-cpd00048#cpd10515## 3.94E-3 1.41E-5 Nitrilotriacetic acid Nitrilotriacetic acid SEED-cpd10393### 0.01 0.00 (NH4)2SO4 Ammonium sulfate SEED-cpd00013#cpd00048## 0.30 0.00 N2 N2 SEED-cpd00528### null null Na2SeO3 x 5 H2O Sodium selenite SEED-cpd00971#cpd03387## 2.95E-6 1.11E-8 CoSO4 x 7 H2O CoSO4 SEED-cpd00048#cpd00149## 1.77E-3 6.28E-6 p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 9.84E-5 7.24E-7 Thiamin-HCl Thiamine-HCl SEED-cpd00099#cpd00305## 1.97E-3 6.56E-6 KAl(SO4)2 x 12 H2O potassium alum alum# 1.97E-4 4.14E-7 Vitamin B12 Coenzyme B12 SEED-cpd00166### 1.97E-5 1.25E-8 Riboflavin Riboflavin SEED-cpd00220### 1.97E-3 5.24E-6 H2 H2 SEED-cpd11640### null null ZnSO4 x 7 H2O ZnSO4 SEED-cpd00034#cpd00048## 1.77E-3 6.15E-6 Distilled water H2O SEED-cpd00001### null null NaCl NaCl SEED-cpd00099#cpd00971## 0.60 0.01 Seed Metabolites list All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations. Seed ID Name Mol Concentration cpd00058 Cu2+ 3.940948822838587E-7 cpd00244 Ni2+ 4.13725081338351E-6 cpd00220 RIBF 5.2353828111911545E-6 cpd00133 Nicotinamide 1.6135278172195687E-5 cpd00030 Mn2+ 2.909405759692394E-5 cpd03396 Selenate 9.79098816836377E-6 cpd00034 Zn2+ 6.1505070067942594E-6 cpd00011 CO2 0.0 cpd00013 NH3 0.023044664442673654 cpd09225 Boric acid 1.5875031750063502E-6 cpd00029 Acetate 0.006001536393316689 cpd00009 Phosphate 0.023808087207489868 cpd00239 H2S 0.0015167227786684874 cpd00263 Pyridoxol 9.649529102979774E-6 cpd08053 Resazurin 4.2980435305848774E-6 cpd00116 Methanol 0.004921259842519685 cpd00443 ABEE 7.237146827234832E-7 cpd00149 Co2+ 6.281345659659941E-6 cpd00166 Calomide 1.2466776041848475E-8 cpd10393 Triglycollamic acid 7.853074216786732E-5 cpd03387 Selenite 1.111102880719402E-8 cpd00971 Na+ 0.026644160931341546 cpd11145 Sodium molybdate 4.062121207197429E-7 cpd00063 Ca2+ 5.256572120651381E-4 cpd00528 N2 0.0 cpd10515 Fe2+ 1.4108610908495782E-5 cpd00644 PAN 7.629860220960752E-6 cpd00048 Sulfate 0.0030100883824283682 cpd11640 H2 0.0 cpd00047 Formate 0.007237146827234831 cpd00084 L-Cysteine 0.004945279772844932 cpd00001 H2O 0.8966535433070867 cpd00305 THI 6.561679790026247E-6 cpd00104 BIOT 4.050419623472992E-6 cpd00099 Cl- 0.034928227576435183 cpd00205 K+ 0.027202059512675857 cpd00254 Mg 7.171234743198083E-4 cpd00393 FOL 1.1210159094577871E-7
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