Medium: CLOSTRIDIUM M1 medium Medium features ID:487 Name:CLOSTRIDIUM M1 medium PH Info: 7.3 - 7.5 Is Complex:true Is Aerobic:true Is SubMedium:false Remarks: Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium487.pdf Metabolites list Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts Name Semi unique name Unique Name Gram Amount Mol Amount CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 1.90E-4 7.97E-7 KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 0.22 0.00 D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 5.00E-5 1.94E-7 HCl HCl SEED-cpd00099### 6.72E-4 1.92E-5 CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.02 0.00 ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 6.98E-5 5.17E-7 Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.30 0.00 Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 1.00E-4 4.90E-7 CuCl2 x 2 H2O CuCl2 SEED-cpd00058#cpd00099## 2.00E-6 1.18E-8 CO2 CO2 SEED-cpd00011### null null NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 1.00 0.02 Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 5.00E-5 1.49E-7 H3BO3 Boric acid SEED-cpd09225### 5.99E-6 9.65E-8 Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 3.59E-5 1.48E-7 NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.39E-5 1.01E-7 L-Alanine L-Alanine SEED-cpd00035### 2.20 0.02 MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 5.00 0.02 H2O H2O SEED-cpd00001### null null Resazurin Resazurin SEED-cpd08053### 1.00E-3 4.37E-6 Folic acid Folic acid SEED-cpd00393### 2.00E-5 4.56E-8 Biotin Biotin SEED-cpd00104### 2.00E-5 8.23E-8 NaHCO3 sodium bicarbonate SEED-cpd00242#cpd00971#cpd09249# 5.00 0.06 K2HPO4 di Potassium hydrogen phosphate SEED-cpd00009#cpd00205## 0.36 0.00 Yeast extract Yeast extract rich-peptone# 1.00 null MnCl2 x 4 H2O MnCl2 SEED-cpd00030#cpd00099## 9.98E-5 5.05E-7 Nicotinic acid Niacin SEED-cpd00218### 5.00E-5 4.10E-7 N2 N2 SEED-cpd00528### null null Na2SeO3 x 5 H2O Sodium selenite SEED-cpd00971#cpd03387## 1.50E-5 5.64E-8 Lipoic acid Lipoic acid SEED-cpd00541### 5.00E-5 2.44E-7 Betaine x H2O Betaine SEED-cpd00540### 6.00 0.04 p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 5.00E-5 3.68E-7 Vitamin B12 Coenzyme B12 SEED-cpd00166### 1.00E-6 6.33E-10 Riboflavin Riboflavin SEED-cpd00220### 5.00E-5 1.33E-7 Distilled water H2O SEED-cpd00001### null null FeCl2 x 4 H2O Iron chloride SEED-cpd00099#cpd10516## 1.50E-3 7.53E-6 NaCl NaCl SEED-cpd00099#cpd00971## 60.00 1.03 Seed Metabolites list All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations. Seed ID Name Mol Concentration cpd00058 Cu2+ 1.178388936106279E-8 cpd00244 Ni2+ 1.0063114596862194E-7 cpd00242 H2CO3 0.05952380952380952 cpd00220 RIBF 1.3297872340425533E-7 cpd00030 Mn2+ 5.048108473754884E-7 cpd09249 Sodium bicarbonate 0.0 cpd00035 L-Alanine 0.02471910112359551 cpd00034 Zn2+ 5.172254548813152E-7 cpd00011 CO2 0.0 cpd00013 NH3 0.018867924528301886 cpd09225 Boric acid 9.653286139489984E-8 cpd00540 BET 0.04439511653718091 cpd00541 Lipoate 2.439024390243903E-7 cpd00009 Phosphate 0.003709323116219668 cpd00239 H2S 0.0012327922745017463 cpd00218 Niacin 4.098360655737705E-7 cpd00263 Pyridoxol 4.901960784313725E-7 cpd08053 Resazurin 4.3668122270742355E-6 cpd00443 ABEE 3.6764705882352943E-7 cpd00149 Co2+ 7.966632389182573E-7 cpd00166 Calomide 6.333122229259026E-10 cpd03387 Selenite 5.644402634054562E-8 cpd00971 Na+ 1.0964725619928177 cpd11145 Sodium molybdate 1.4820563119646202E-7 cpd00063 Ca2+ 1.7107554827873063E-4 cpd00528 N2 0.0 cpd00644 PAN 1.9379844961240311E-7 cpd10516 fe3 7.534035003126625E-6 cpd00048 Sulfate 0.020238818053025704 cpd00001 H2O 0.990997506234414 cpd00305 THI 1.486767766874814E-7 cpd00099 Cl- 1.0537312178156768 cpd00104 BIOT 8.23045267489712E-8 cpd00205 K+ 0.005766794380587484 cpd00254 Mg 0.020238818053025704 cpd00393 FOL 4.555808656036447E-8
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