Komodo Logo KOMODO -- the Known Media Database
A platform for recommending microbial media
Home   Organisms Media   Media List   GrowRec   Acknowledgement   Contact Us

Medium:  Substrate for DSM 6268



Medium features

ID:500.4
Name: Substrate for DSM 6268
PH Info: 7 - 7.2
Is Complex:true
Is Aerobic:true
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium500.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 1.87E-4 7.87E-7
KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 0.22 0.00
D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 4.94E-5 1.92E-7
HCl HCl SEED-cpd00099### 6.64E-4 1.90E-5
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.25 0.00
ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 6.90E-5 5.11E-7
Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.30 0.00
Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 9.88E-5 4.84E-7
CuCl2 x 2 H2O CuCl2 SEED-cpd00058#cpd00099## 1.97E-6 1.16E-8
CO2 CO2 SEED-cpd00011### null null
NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.49 0.01
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 4.94E-5 1.47E-7
H3BO3 Boric acid SEED-cpd09225### 5.91E-6 9.54E-8
Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 3.55E-5 1.46E-7
NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.37E-5 9.94E-8
MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 0.49 0.00
H2O H2O SEED-cpd00001### null null
Cysteine-HCl x H2O Cysteine-HCl SEED-cpd00084#cpd00099## 0.30 0.00
Resazurin Resazurin SEED-cpd08053### 4.94E-4 2.16E-6
Folic acid Folic acid SEED-cpd00393### 1.98E-5 4.50E-8
Biotin Biotin SEED-cpd00104### 1.98E-5 8.13E-8
Na2WO4 x 2 H2O Na2WO4 SEED-cpd00971#cpd15574## 3.95E-6 2.68E-8
NaHCO3 sodium bicarbonate SEED-cpd00242#cpd00971#cpd09249# 2.96 0.04
K2HPO4 di Potassium hydrogen phosphate SEED-cpd00009#cpd00205## 0.34 0.00
Yeast extract Yeast extract rich-peptone# 0.99 null
MnCl2 x 4 H2O MnCl2 SEED-cpd00030#cpd00099## 9.86E-5 4.99E-7
FeSO4 x 7 H2O Iron sulfate SEED-cpd00048#cpd10515## 1.98E-3 7.08E-6
Nicotinic acid Niacin SEED-cpd00218### 4.94E-5 4.05E-7
N2 N2 SEED-cpd00528### null null
Na2SeO3 x 5 H2O Sodium selenite SEED-cpd00971#cpd03387## 2.96E-6 1.12E-8
Lipoic acid Lipoic acid SEED-cpd00541### 4.94E-5 2.41E-7
p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 4.94E-5 3.63E-7
Vitamin B12 Coenzyme B12 SEED-cpd00166### 9.88E-7 6.26E-10
Riboflavin Riboflavin SEED-cpd00220### 4.94E-5 1.31E-7
disodium L(+)tartrate disodium L(+)tartrate SEED-cpd00666#cpd00971## 4.94 0.03
Distilled water H2O SEED-cpd00001### null null
FeCl2 x 4 H2O Iron chloride SEED-cpd00099#cpd10516## 1.48E-3 7.44E-6
NaCl NaCl SEED-cpd00099#cpd00971## 2.22 0.04
NaOH Sodium hydroxide SEED-cpd09244### 4.94E-4 2.74E-5


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00058 Cu2+ 1.1644159447690505E-8
cpd00244 Ni2+ 9.943789127334187E-8
cpd00242 H2CO3 0.03529079616036138
cpd00220 RIBF 1.3140190059709026E-7
cpd00030 Mn2+ 4.988249479994946E-7
cpd09249 Sodium bicarbonate 0.0
cpd00034 Zn2+ 5.110923467206673E-7
cpd00011 CO2 0.0
cpd09244 Sodium hydroxide 2.744839701361441E-5
cpd00013 NH3 0.009322097098963384
cpd09225 Boric acid 9.538820295938722E-8
cpd00541 Lipoate 2.410103152414924E-7
cpd00009 Phosphate 0.003637827550871029
cpd00239 H2S 0.0012181741842902636
cpd00218 Niacin 4.0497634938119623E-7
cpd00263 Pyridoxol 4.843834767108426E-7
cpd08053 Resazurin 2.157515922467508E-6
cpd00443 ABEE 3.6328760753313193E-7
cpd00149 Co2+ 7.8721663924729E-7
cpd00166 Calomide 6.258025918240145E-10
cpd03387 Selenite 1.1154945917103882E-8
cpd15574 tungstate 2.683346347563119E-8
cpd00971 Na+ 0.12699578929243618
cpd11145 Sodium molybdate 1.4644825217041705E-7
cpd00666 Tartrate 0.02546758485799275
cpd00063 Ca2+ 0.0016887463406529595
cpd00528 N2 0.0
cpd10515 Fe2+ 7.082188084501836E-6
cpd00644 PAN 1.9150044428103077E-7
cpd10516 fe3 7.444698619690341E-6
cpd00048 Sulfate 0.002006965394905224
cpd00084 L-Cysteine 0.00170222617138694
cpd00001 H2O 0.999997535804757
cpd00305 THI 1.4691381095600933E-7
cpd00099 Cl- 0.05277285055482175
cpd00104 BIOT 8.13285837440427E-8
cpd00205 K+ 0.005614112135851266
cpd00254 Mg 0.001999883206820722
cpd00393 FOL 4.5017872095221815E-8

If you encounter problems please send their details to raphy.zarecki@gmail.com