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Medium:  For DSM 6139



Medium features

ID:505.2
Name: For DSM 6139
PH Info: 7.7 - 7.9, Na2CO3
Is Complex:true
Is Aerobic:true
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium505.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 1.89E-4 7.95E-7
KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 1.40 0.01
D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 4.99E-5 1.93E-7
HCl HCl SEED-cpd00099### 6.71E-4 1.92E-5
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.15 0.00
ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 6.97E-5 5.16E-7
Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.25 0.00
Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 9.98E-5 4.89E-7
CuCl2 x 2 H2O CuCl2 SEED-cpd00058#cpd00099## 1.99E-6 1.18E-8
NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.50 0.01
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 4.99E-5 1.48E-7
Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 3.58E-5 1.48E-7
H3BO3 Boric acid SEED-cpd09225### 5.97E-6 9.63E-8
MgCl2 x 6 H2O Magnesium chloride SEED-cpd00099#cpd00254#cpd04877# 0.20 0.00
NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.39E-5 1.00E-7
H2O H2O SEED-cpd00001### null null
Resazurin Resazurin SEED-cpd08053### 9.98E-4 4.36E-6
Na2CO3 Sodium carbonate SEED-cpd00242#cpd00971## null null
Folic acid Folic acid SEED-cpd00393### 2.00E-5 4.55E-8
Biotin Biotin SEED-cpd00104### 2.00E-5 8.21E-8
NaHCO3 sodium bicarbonate SEED-cpd00242#cpd00971#cpd09249# 1.50 0.02
Na2WO4 x 2 H2O Na2WO4 SEED-cpd00971#cpd15574## 3.99E-6 2.71E-8
Yeast extract Yeast extract rich-peptone# 0.05 null
MnCl2 x 4 H2O MnCl2 SEED-cpd00030#cpd00099## 9.96E-5 5.04E-7
sodium cinnamate sodium cinnamate SEED-cpd00971#cpd07326## 1.70 0.01
Nicotinic acid Niacin SEED-cpd00218### 4.99E-5 4.09E-7
Na2SeO3 x 5 H2O Sodium selenite SEED-cpd00971#cpd03387## 2.99E-6 1.13E-8
Lipoic acid Lipoic acid SEED-cpd00541### 4.99E-5 2.43E-7
p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 4.99E-5 3.67E-7
Vitamin B12 Coenzyme B12 SEED-cpd00166### 9.98E-7 6.32E-10
Riboflavin Riboflavin SEED-cpd00220### 4.99E-5 1.33E-7
FeCl2 x 4 H2O Iron chloride SEED-cpd00099#cpd10516## 1.49E-3 7.52E-6
NaOH Sodium hydroxide SEED-cpd09244### 4.99E-4 2.77E-5


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00058 Cu2+ 1.176036862381516E-8
cpd00244 Ni2+ 1.0043028539782629E-7
cpd00242 H2CO3 0.017821499857428
cpd00220 RIBF 1.3271329681063406E-7
cpd00030 Mn2+ 5.03803240893701E-7
cpd09249 Sodium bicarbonate 0.0
cpd00034 Zn2+ 5.161930687438276E-7
cpd09244 Sodium hydroxide 2.7722333111554667E-5
cpd00013 NH3 0.009415132000150641
cpd09225 Boric acid 9.634018103283417E-8
cpd04877 Magnesium chloride 0.0
cpd00541 Lipoate 2.4341560780877267E-7
cpd00009 Phosphate 0.010349671028313741
cpd00239 H2S 0.0010252763427326568
cpd00218 Niacin 4.09018029514741E-7
cpd00263 Pyridoxol 4.892176431450824E-7
cpd08053 Resazurin 4.358096035004227E-6
cpd00443 ABEE 3.6691323235881175E-7
cpd00149 Co2+ 7.950730927327915E-7
cpd00166 Calomide 6.320481266725574E-10
cpd03387 Selenite 1.1266272722663798E-8
cpd15574 tungstate 2.710126251231413E-8
cpd00971 Na+ 0.02985246501774661
cpd11145 Sodium molybdate 1.479098115733154E-7
cpd00063 Ca2+ 0.0010234374225791634
cpd07326 Cinnamic acid 0.00998003992015968
cpd00644 PAN 1.9341162635968373E-7
cpd10516 fe3 7.5189970091084075E-6
cpd00001 H2O 0.9600773515313513
cpd00305 THI 1.4838001665417306E-7
cpd00099 Cl- 0.013467793332358993
cpd00104 BIOT 8.214024625645828E-8
cpd00205 K+ 0.010349671028313741
cpd00254 Mg 9.837397654174156E-4
cpd00393 FOL 4.546715225585276E-8

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