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Medium: METHANOCALCULUS PUMILUS medium



Medium features

ID:892
Name:METHANOCALCULUS PUMILUS medium
PH Info: 7.3 - 7.5
Is Complex:true
Is Aerobic:true
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium892.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 4.85E-5 1.88E-7
CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 4.66E-4 1.96E-6
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 1.94E-3 1.33E-5
Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.49 0.00
ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 1.94E-3 1.44E-5
Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 9.71E-5 4.76E-7
KOH KOH SEED-cpd00001#cpd00205## null null
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 4.85E-5 1.44E-7
CO2 CO2 SEED-cpd00011### null null
NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.87 0.02
CuCl2 x 2 H2O CuCl2 SEED-cpd00058#cpd00099## 4.85E-4 2.87E-6
Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 4.66E-4 1.92E-6
H3BO3 Boric acid SEED-cpd09225### 1.94E-4 3.13E-6
MgCl2 x 6 H2O Magnesium chloride SEED-cpd00099#cpd00254#cpd04877# 0.35 0.00
NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.33E-3 9.79E-6
H2O H2O SEED-cpd00001### null null
Trypticase (BBL) Trypticase rich-peptone# 1.94 null
Cysteine-HCl x H2O Cysteine-HCl SEED-cpd00084#cpd00099## 0.49 0.00
Resazurin Resazurin SEED-cpd08053### 4.85E-4 2.12E-6
Na2CO3 Sodium carbonate SEED-cpd00242#cpd00971## 4.85 0.05
Folic acid Folic acid SEED-cpd00393### 1.94E-5 4.42E-8
Biotin Biotin SEED-cpd00104### 1.94E-5 7.99E-8
Yeast extract Yeast extract rich-peptone# 1.94 null
K2HPO4 di Potassium hydrogen phosphate SEED-cpd00009#cpd00205## 0.39 0.00
MnCl2 x 4 H2O MnCl2 SEED-cpd00030#cpd00099## 1.94E-3 9.83E-6
Nitrilotriacetic acid (NTA) NTA SEED-cpd10393### 0.25 0.00
Nicotinic acid Niacin SEED-cpd00218### 4.85E-5 3.98E-7
N2 N2 SEED-cpd00528### null null
Lipoic acid Lipoic acid SEED-cpd00541### 4.85E-5 2.37E-7
Na2SeO3 x 5 H2O Sodium selenite SEED-cpd00971#cpd03387## 5.05E-4 1.90E-6
p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 4.85E-5 3.57E-7
FeCl3 x 6 H2O Iron chloride SEED-cpd00099#cpd10516## 0.03 0.00
Riboflavin Riboflavin SEED-cpd00220### 4.85E-5 1.29E-7
Vitamin B12 Coenzyme B12 SEED-cpd00166### 9.71E-7 6.15E-10
H2 H2 SEED-cpd11640### null null
Distilled water H2O SEED-cpd00001### null null
NaCl NaCl SEED-cpd00099#cpd00971## 9.73 0.17


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00058 Cu2+ 2.8673177389479237E-6
cpd00244 Ni2+ 9.794439207140144E-6
cpd00242 H2CO3 0.045367933944288175
cpd00220 RIBF 1.291055567031605E-7
cpd00030 Mn2+ 9.826657757163635E-6
cpd00034 Zn2+ 1.4383315354189142E-5
cpd00011 CO2 0.0
cpd00013 NH3 0.016486535995603593
cpd09225 Boric acid 3.1318509238960228E-6
cpd04877 Magnesium chloride 0.0
cpd00541 Lipoate 2.3679848448969927E-7
cpd00009 Phosphate 0.002231893761856936
cpd00239 H2S 0.0019948095056662564
cpd00218 Niacin 3.9789909279006847E-7
cpd00263 Pyridoxol 4.759185227489054E-7
cpd08053 Resazurin 2.1198117607156487E-6
cpd00443 ABEE 3.5693889206167906E-7
cpd00149 Co2+ 1.9588878414280293E-6
cpd00166 Calomide 6.148662358503909E-10
cpd10393 Triglycollamic acid 0.0013220409006403637
cpd03387 Selenite 1.899734219875969E-6
cpd00971 Na+ 0.2624599492034902
cpd11145 Sodium molybdate 1.9233157964330507E-6
cpd00063 Ca2+ 1.3460522753341614E-5
cpd00528 N2 0.0
cpd00644 PAN 1.8815383457514864E-7
cpd10516 fe3 9.712335025198116E-5
cpd11640 H2 0.0
cpd00084 L-Cysteine 0.002787464215928128
cpd00001 H2O 1.0
cpd00305 THI 1.443463851334771E-7
cpd00099 Cl- 0.19084220307507244
cpd00104 BIOT 7.990730752327302E-8
cpd00205 K+ 0.004463787523713872
cpd00254 Mg 0.0017225951853464569
cpd00393 FOL 4.423115200035386E-8

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