Medium: For DSM 16632 and DSM 16643 Medium features ID:119.1 Name: For DSM 16632 and DSM 16643 PH Info: 7.5, NaOH Is Complex:true Is Aerobic:true Is SubMedium:false Remarks: Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium119.pdf Metabolites list Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts Name Semi unique name Unique Name Gram Amount Mol Amount CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 1.86E-4 7.80E-7 KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 0.49 0.00 D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 4.90E-5 1.90E-7 HCl HCl SEED-cpd00099### 6.58E-4 1.88E-5 CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.05 0.00 ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 6.84E-5 5.07E-7 Trypticase Peptone trypticase peptone rich-peptone# 1.96 null Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.49 0.00 Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 9.79E-5 4.80E-7 2-Methylbutyric acid 2-methylbutyric acid 2-methylbutyric acid# 0.49 0.00 CuCl2 x 2 H2O CuCl2 SEED-cpd00058#cpd00099## 1.95E-6 1.15E-8 Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 4.90E-5 1.46E-7 NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.39 0.01 CO2 CO2 SEED-cpd00011### null null rumen fluid Rumen fluid rich-rumen# 48.97 0.05 H3BO3 Boric acid SEED-cpd09225### 5.86E-6 9.45E-8 Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 3.52E-5 1.45E-7 Isovaleric acid Isovaleric acid SEED-cpd05178### 0.49 0.00 NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.34E-5 9.86E-8 Isobutyric acid isobutyric acid SEED-cpd01711### 0.49 0.01 MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 0.39 0.00 H2O H2O SEED-cpd00001### null null Cysteine-HCl x H2O Cysteine-HCl SEED-cpd00084#cpd00099## 0.49 0.00 Resazurin Resazurin SEED-cpd08053### 9.79E-4 4.28E-6 Folic acid Folic acid SEED-cpd00393### 1.96E-5 4.46E-8 Biotin Biotin SEED-cpd00104### 1.96E-5 8.06E-8 Na-formate Na-formate SEED-cpd00047#cpd00971## 1.96 0.03 NaHCO3 sodium bicarbonate SEED-cpd00242#cpd00971#cpd09249# 3.92 0.05 Yeast extract Yeast extract rich-peptone# 0.98 null MnCl2 x 4 H2O MnCl2 SEED-cpd00030#cpd00099## 9.77E-5 4.94E-7 FeSO4 x 7 H2O Iron sulfate SEED-cpd00048#cpd10515## 1.96E-3 7.02E-6 Na-acetate Na-acetate SEED-cpd00029#cpd00971## 0.98 0.01 Valeric acid Valeric acid SEED-cpd00597### 0.49 0.00 Nicotinic acid Niacin SEED-cpd00218### 4.90E-5 4.01E-7 Lipoic acid Lipoic acid SEED-cpd00541### 4.90E-5 2.39E-7 p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 4.90E-5 3.60E-7 Vitamin B12 Coenzyme B12 SEED-cpd00166### 9.79E-7 6.20E-10 Riboflavin Riboflavin SEED-cpd00220### 4.90E-5 1.30E-7 H2 H2 SEED-cpd11640### null null Distilled water H2O SEED-cpd00001### null null NaCl NaCl SEED-cpd00099#cpd00971## 0.39 0.01 FeCl2 x 4 H2O Iron chloride SEED-cpd00099#cpd10516## 1.47E-3 7.38E-6 NaOH Sodium hydroxide SEED-cpd09244### null null Seed Metabolites list All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations. Seed ID Name Mol Concentration cpd00058 Cu2+ 1.1541517493695188E-8 cpd00244 Ni2+ 9.856135746192157E-8 cpd00242 H2CO3 0.04663961568956671 cpd01711 Isobutyrate 0.005628919134947707 cpd00220 RIBF 1.3024360764373685E-7 cpd00030 Mn2+ 4.944278622678633E-7 cpd09249 Sodium bicarbonate 0.0 cpd00034 Zn2+ 5.065871252510432E-7 cpd00011 CO2 0.0 cpd09244 Sodium hydroxide 0.0 cpd00013 NH3 0.007391939090421895 cpd09225 Boric acid 9.454736669431912E-8 cpd00029 Acetate 0.011944291822937816 cpd00541 Lipoate 2.3888583645875635E-7 cpd00009 Phosphate 0.003627525664744078 cpd00239 H2S 0.0020123935267739902 cpd00218 Niacin 4.014065284757791E-7 cpd00263 Pyridoxol 4.801136909220103E-7 cpd08053 Resazurin 4.276995325244109E-6 cpd00443 ABEE 3.600852681915077E-7 cpd00149 Co2+ 7.802774132402127E-7 cpd00166 Calomide 6.202862124641552E-10 cpd00971 Na+ 0.09817050929796502 cpd11145 Sodium molybdate 1.4515732732268562E-7 cpd00063 Ca2+ 3.3492389628584615E-4 cpd10515 Fe2+ 7.019759394236881E-6 cpd00644 PAN 1.8981238943428315E-7 cpd10516 fe3 7.3790744398889555E-6 cpd00048 Sulfate 0.0015928233286812655 cpd11640 H2 0.0 cpd00047 Formate 0.028806821455320618 cpd00084 L-Cysteine 0.0028120353990264166 cpd05178 Isovaleric acid 0.004848672918222282 cpd00001 H2O 0.9510259610523154 cpd00305 THI 1.4561878226002096E-7 cpd00104 BIOT 8.061168143875728E-8 cpd00099 Cl- 0.017666119338107716 cpd00393 FOL 4.462104462327567E-8 cpd00205 K+ 0.003627525664744078 cpd00254 Mg 0.0015858035692870285 cpd00597 Valerate 0.004848672918222282
If you encounter problems please send their details to raphy.zarecki@gmail.com