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Medium: METHANOMICROCOCCUS medium



Medium features

ID:120b
Name:METHANOMICROCOCCUS medium
PH Info: 7.2
Is Complex:true
Is Aerobic:true
Is SubMedium:false
Remarks:
Instructions:http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium120b.pdf


Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
D-Ca-pantothenate D-Ca-pantothenate SEED-cpd00063#cpd00644## 4.53E-5 1.76E-7
KH2PO4 Potassium dihydrogen phosphate SEED-cpd00009#cpd00205## 0.21 0.00
CoCl2 x 6 H2O CoCl2 SEED-cpd00099#cpd00149## 1.72E-4 7.22E-7
HCl HCl SEED-cpd00099### 6.09E-4 1.74E-5
Yeast extract (Difco) Yeast extract rich-peptone# 1.81 null
CaCl2 x 2 H2O Calcium chloride SEED-cpd00063#cpd00099## 0.23 0.00
ZnCl2 ZnCl2 SEED-cpd00034#cpd00099## 6.33E-5 4.69E-7
Na2S x 9 H2O Sodium sulfide hydrate SEED-cpd00239#cpd00971## 0.69 0.00
Casitone casitone rich-peptone# 1.81 null
Pyridoxine HCl Pyridoxine HCl SEED-cpd00099#cpd00263## 9.07E-5 4.45E-7
Methanol Methanol SEED-cpd00116### null null
CO2 CO2 SEED-cpd00011### null null
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 4.53E-5 1.35E-7
NH4Cl Ammonium chloride SEED-cpd00013#cpd00099## 0.45 0.01
CuCl2 x 2 H2O CuCl2 SEED-cpd00058#cpd00099## 1.81E-6 1.07E-8
Na-bicarbonate Na-bicarbonate SEED-cpd00242#cpd00971## 1.85 0.02
H3BO3 Boric acid SEED-cpd09225### 5.43E-6 8.75E-8
Na2MoO4 x 2 H2O Na2MoO4 SEED-cpd00971#cpd11145## 3.26E-5 1.34E-7
NiCl2 x 6 H2O NiCl2 SEED-cpd00099#cpd00244## 2.17E-5 9.13E-8
MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 0.45 0.00
H2O H2O SEED-cpd00001### null null
Resazurin Resazurin SEED-cpd08053### 9.07E-4 3.96E-6
Cysteine-HCl x H2O Cysteine-HCl SEED-cpd00084#cpd00099## 0.69 0.00
Folic acid Folic acid SEED-cpd00393### 1.81E-5 4.13E-8
Biotin Biotin SEED-cpd00104### 1.81E-5 7.46E-8
NaHCO3 sodium bicarbonate SEED-cpd00242#cpd00971#cpd09249# 0.77 0.01
Coenzyme M Coenzyme M SEED-cpd02246### 9.26E-7 6.57E-9
K2HPO4 di Potassium hydrogen phosphate SEED-cpd00009#cpd00205## 0.32 0.00
MnCl2 x 4 H2O MnCl2 SEED-cpd00030#cpd00099## 9.05E-5 4.58E-7
Na-acetate Na-acetate SEED-cpd00029#cpd00971## 2.31E-3 2.82E-5
FeSO4 x 7 H2O Iron sulfate SEED-cpd00048#cpd10515## 1.81E-3 6.50E-6
Nicotinic acid Niacin SEED-cpd00218### 4.53E-5 3.72E-7
N2 N2 SEED-cpd00528### null null
Lipoic acid Lipoic acid SEED-cpd00541### 4.53E-5 2.21E-7
p-Aminobenzoic acid p Aminobenzoic acid (PABA) SEED-cpd00443### 4.53E-5 3.33E-7
Riboflavin Riboflavin SEED-cpd00220### 4.53E-5 1.21E-7
Vitamin B12 Coenzyme B12 SEED-cpd00166### 9.07E-7 5.74E-10
H2 H2 SEED-cpd11640### null null
Distilled water H2O SEED-cpd00001### null null
FeCl2 x 4 H2O Iron chloride SEED-cpd00099#cpd10516## 1.36E-3 6.83E-6
NaCl NaCl SEED-cpd00099#cpd00971## 2.04 0.04


Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00058 Cu2+ 1.0686590271939992E-8
cpd00244 Ni2+ 9.126051616844593E-8
cpd00242 H2CO3 0.031222631614404386
cpd00220 RIBF 1.2059593300346005E-7
cpd00030 Mn2+ 4.578035761739475E-7
cpd09249 Sodium bicarbonate 0.0
cpd00034 Zn2+ 4.690621530102254E-7
cpd00011 CO2 0.0
cpd00013 NH3 0.008555485058358674
cpd09225 Boric acid 8.754385805029551E-8
cpd00029 Acetate 2.8229448961156277E-5
cpd00541 Lipoate 2.2119058931366332E-7
cpd00009 Phosphate 0.003338667139588531
cpd00239 H2S 0.0028302078961268645
cpd00218 Niacin 3.716727115516474E-7
cpd00263 Pyridoxol 4.4454971381667625E-7
cpd08053 Resazurin 3.960180856707509E-6
cpd00116 Methanol 0.018328073421119452
cpd00443 ABEE 3.3341228536250723E-7
cpd00149 Co2+ 7.224790863335304E-7
cpd00166 Calomide 5.743390856149585E-10
cpd00971 Na+ 0.07209229025890787
cpd11145 Sodium molybdate 1.344049327061904E-7
cpd00063 Ca2+ 0.0015498705850661974
cpd00528 N2 0.0
cpd10515 Fe2+ 6.499777216886002E-6
cpd00644 PAN 1.7575221243915109E-7
cpd10516 fe3 6.832476333230515E-6
cpd00048 Sulfate 0.0018419205750027986
cpd11640 H2 0.0
cpd00084 L-Cysteine 0.003954815340352986
cpd00001 H2O 0.9168548502143994
cpd02246 CoM 6.566850538481744E-9
cpd00305 THI 1.348322057963157E-7
cpd00104 BIOT 7.464044577662713E-8
cpd00099 Cl- 0.050825595508702845
cpd00393 FOL 4.1315782058588595E-8
cpd00205 K+ 0.00515242997196057
cpd00254 Mg 0.0018354207977859126

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