Komodo Logo KOMODO -- the Known Media Database
A platform for recommending microbial media
Home   Organisms Media   Media List   GrowRec   Acknowledgement   Contact Us


Medium features

PH Info: 7.8
Is Complex:true
Is Aerobic:false
Is SubMedium:false

Metabolites list

Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name Semi unique name Unique Name Gram Amount Mol Amount
Trypticase Trypticase rich-peptone# 2.00 null
MgSO4 x 7 H2O Magnesium sulfate SEED-cpd00048#cpd00254## 0.27 0.00
Na-glutamate Na-glutamate SEED-cpd00023#cpd00971## 0.10 0.00
Tris/HCl-buffer, /ph/ 7.8 Tris/HCl buffer Tris# 1.58 0.01
K2HPO4 di Potassium hydrogen phosphate SEED-cpd00009#cpd00205## 1.00 0.01
Yeast extract Yeast extract rich-peptone# 2.00 null
Na-acetate Na-acetate SEED-cpd00029#cpd00971## 1.00 0.01
Thiamine-HCl x 2 H2O Thiamine-HCl SEED-cpd00099#cpd00305## 2.00E-4 5.95E-7
Soya Peptone Peptone from soy rich-peptone# 2.00 null
Biotin Biotin SEED-cpd00104### 5.00E-5 2.06E-7

Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID Name Mol Concentration
cpd00029 Acetate 0.012195121951219513
cpd00009 Phosphate 0.005747126436781609
cpd00971 Na+ 0.012786837927550873
cpd00305 THI 5.947071067499256E-7
cpd00104 BIOT 2.05761316872428E-7
cpd00099 Cl- 5.947071067499256E-7
cpd00205 K+ 0.011494252873563218
cpd00254 Mg 0.001092896174863388
cpd00023 L-Glutamate 5.91715976331361E-4
cpd00048 Sulfate 0.001092896174863388

If you encounter problems please send their details to raphy.zarecki@gmail.com